Bioinformatics Engineer

Job DetailsRole SummaryAs a Bioinformatics Engineer, you will work for the world leader in the industry, with a career where you will have the opportunity to collaborate and affect change while expanding your leadership skills and technical knowledge. You can make a real impact in a market that is growing and developing.ResponsibilitiesDevelop, validate, and implement new software applications, databases, processes, and interfaces relating to next-generation sequencing (NGS) data analysis, advanced diagnostic testing development and validation, data quality review, and clinical reporting.Serve as SME on specific systems/workflows supporting advanced development and high-tier production support.Prepare reports and other communications of technical activities related to business objectives such as product/process development and improvement.Qualifications3+ years of experience with a Bachelor's degree or 1+ year with a Master's degree and experience in an industrial or academic setting working with clinical and biological data or equivalent and underlying technologies including bioinformatic methods, database development, query/scripting/programming languages, cloud development, agile methodology, DevOps and other data analysis tools.Work Experience / SkillsBioinformatics tools such as Dragen, bwa, VEP, FastQC, MultiQC, samtools, bedtools.Experience with sequencing data analysis, bioinformatics, variant data analysis.Pipeline workflow management languages: Nextflow (preferred), Cromwell, CWL, etc.Cloud Computing: AWS.Infrastructure management: Terraform, AWS CDKProgramming Languages: Advanced level with interpreted/scripting languages such as Python, JavaScript/typescript, R, etc.Containerizing: Docker.Experience with designing and working with application programming interfaces (e.g. JSON based RESTful APIs).Web Frameworks: Python Flask, React Native, Bootstrap.Reporting: Familiarity with R Markdown, Jupyter Notebook.Visualization: Experience with any ggplot2/tidyverse, Plotly, matplot lib, Tableau, d3.js.Source Control: Git.CI/CD: GitHub CI/CD.Familiarity with AI developer tools like GitHub Copilot.Understanding of environment management.Experience of working in clinical diagnostics setting (regulations, controlled processes, environment management) is a plus.