Bioinformatics Engineer

Bioinformatics EngineerLocation: Secaucus, NJ (Remote)Bioinformatics tools such as Dragen, bwa, VEP, FastQC, MultiQC, samtools, bedtools. Experience with sequencing data analysis, bioinformatics, variant data analysis. Pipeline workflow management languages: Nextflow (preferred), Cromwell, CWL, etc. Cloud Computing: AWS. Infrastructure management: Terraform, AWS CDK Programming Languages: Advanced level with interpreted/scripting languages such as Python, JavaScript/typescript, R, etc. Containerizing: Docker. Experience with designing and working with application programming interfaces (e.g. JSON based RESTful APIs). Web Frameworks: Python Flask, React Native, Bootstrap. Reporting: Familiarity with R Markdown, Jupyter Notebook. Visualization: Experience with any ggplot2/tidyverse, Plotly, matplot lib, Tableau, d3.js. Source Control: Git. CI/CD: GitHub CI/CD. Familiarity with AI developer tools like GitHub Copilot. Understanding of environment management. Experience of working in clinical diagnostics setting (regulations, controlled processes, environment management) is a plus.